Glyma18g09020.1 (Glycine max)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Glyma18g09020.1 T00968_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma18g09020.1 CCCH ZF 152 176
Glyma18g09020.1 RRM 313 373

Links

Other CCCH ZF,RRM family RBPs
Other Glycine max RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.724
Medtr3g077080 Medicago truncatula Medtr3g077080 N 0.779
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.736
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.954
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.724
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.736
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.736
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.736
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.724
ppa019338m Prunus persica ppa019338m N 0.782