GSVIVG00037782001 (Vitis vinifera)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		GSVIVG00037782001 T00721_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00037782001 CCCH ZF 160 185
GSVIVT00037782001 RRM 323 382

Links

Other CCCH ZF,RRM family RBPs
Other Vitis vinifera RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.839
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.839
ppa019338m Prunus persica ppa019338m N 0.816
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.805
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.805
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.793
AT2G05160 Arabidopsis thaliana AT2G05160-TAIR-G N 0.782
27613.m000645 Ricinus communis 27613.m000645 N 0.770
MDP0000906147 Malus x domestica MDP0000906147 N 0.759
PK01281.1 Cannabis sativa PK01281.1 N 0.759
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.759
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.747
29223.m000023 Ricinus communis 29223.m000023 N 0.747
PK20504.1 Cannabis sativa PK20504.1 N 0.736
XM_002876131.1 Arabidopsis lyrata fgenesh2_kg.5__1664__AT3G52980.1 N 0.736
mgf003557m Mimulus guttatus mgf003557m N 0.724
Glyma18g09020.1 Glycine max Glyma18g09020.1 N 0.724
ppa003564m Prunus persica ppa003564m N 0.713
MDP0000214614 Malus x domestica MDP0000214614 N 0.713
Cucsa.042290 Cucumis sativus Cucsa.042290 N 0.713
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.701