ZFN2 (Arabidopsis thaliana)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 AT2G32930-TAIR-G T01890_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT2G32930.1-P CCCH ZF 45 71
AT2G32930.1-P CCCH ZF 95 111
AT2G32930.1-P CCCH ZF 130 156
AT2G32930.1-P CCCH ZF 262 288
AT2G32930.1-P CCCH ZF 308 334

Links

Other CCCH ZF family RBPs
Other Arabidopsis thaliana RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002892212.1 Arabidopsis lyrata Al_scaffold_0001_429 N 0.799
AT1G04990 Arabidopsis thaliana AT1G04990-TAIR-G N 0.799
XM_002881207.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4001392 N 0.903