CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZC3H4
(
Ornithorhynchus anatinus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOANG00000001794
T03018_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000002851
CCCH ZF
289
314
KGKVICKYFVEGRCTWGEHCNFSHDI
ENSOANP00000002851
CCCH ZF
318
343
KKRELCKFYITGFCARAENCPYMHGD
ENSOANP00000002851
CCCH ZF
344
367
FPCKLFHTTGNCINGDDCMFSHEP
Links
Other
CCCH ZF
family RBPs
Other
Ornithorhynchus anatinus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RCAN2_BOVIN
Bos taurus
ENSBTAG00000009302
N
0.000
RCAN2
Ochotona princeps
ENSOPRG00000010918
N
0.000
ENSPPYG00000016668
Pongo pygmaeus
ENSPPYG00000016668
N
0.000
RCAN2_PANTR
Pan troglodytes
ENSPTRG00000018233
N
0.000
RCAN2
Pteropus vampyrus
ENSPVAG00000006996
N
0.000
RCAN2
Sorex araneus
ENSSARG00000000336
N
0.000
RCAN2
Sus scrofa
ENSSSCG00000001716
N
0.000
RCAN2
Tupaia belangeri
ENSTBEG00000007796
N
0.000
RCAN2
Taeniopygia guttata
ENSTGUG00000013243
N
0.000
RCAN2
Tarsius syrichta
ENSTSYG00000007961
N
0.000
RCAN2
Tursiops truncatus
ENSTTRG00000008427
N
0.000
RCAN2
Vicugna pacos
ENSVPAG00000003619
N
0.000
RCAN2
Ornithorhynchus anatinus
ENSOANG00000008271
N
0.000
RCAN2
Monodelphis domestica
ENSMODG00000018896
N
0.000
RCAN2
Canis familiaris
ENSCAFG00000002023
N
0.000
LOC100412694
Callithrix jacchus
ENSCJAG00000012084
N
0.000
RCAN2
Dasypus novemcinctus
ENSDNOG00000012767
N
0.000
LOC100055752
Equus caballus
ENSECAG00000018543
N
0.000
RCAN2
Erinaceus europaeus
ENSEEUG00000006689
N
0.000
RCAN2
Felis catus
ENSFCAG00000014401
N
0.000
RCAN2
Homo sapiens
ENSG00000172348
N
0.000
ENSGGOG00000004672
Gorilla gorilla
ENSGGOG00000004672
N
0.000
RCAN2
Meleagris gallopavo
ENSMGAG00000014275
N
0.000
RCAN2
Myotis lucifugus
ENSMLUG00000015296
N
0.000
RCAN2
Macaca mulatta
ENSMMUG00000019246
N
0.000
Ame_R014199
Ailuropoda melanoleuca
Ame_R014199
N
0.000