CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ZC3H8
(
Oryctolagus cuniculus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOCUG00000011253
T03053_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000009687
CCCH ZF
207
232
KGKQICKYFLERKCIKGDQCKFDHDA
ENSOCUP00000009687
CCCH ZF
236
261
KKKKMCKFYVQGYCTRGENCLYLHNE
ENSOCUP00000009687
CCCH ZF
263
285
PCKFYHTGTKCYQGEYCKFSHAP
Links
Other
CCCH ZF
family RBPs
Other
Oryctolagus cuniculus
RBPs
57 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LbrM30_V2.2150
Leishmania braziliensis
LbrM30_V2.2150
N
0.000
LinJ30_V3.2210
Leishmania infantum
LinJ30_V3.2210
N
0.000
LmjF30.2200
Leishmania major
LmjF30.2200
N
0.000