CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GK10580
(
Drosophila willistoni
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0212595
T03798_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0239723
CCCH ZF
343
369
DTYSLCETFAESYTCHYGAQCVEAHGL
Links
Other
CCCH ZF
family RBPs
Other
Drosophila willistoni
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CC1G_04529
Coprinopsis cinerea
CC1G_04529
N
0.000
e_gww2.6.559.1
Phanerochaete chrysosporium
e_gww2.6.559.1
N
0.000
estExt_fgenesh2_pg.C_250108
Laccaria bicolor
estExt_fgenesh2_pg.C_250108
N
0.000
estExt_Genewise1Plus.C_1900018
Postia placenta
estExt_Genewise1Plus.C_1900018
N
0.000
fgenesh3_pm.29__13
Postia placenta
fgenesh3_pm.29__13
N
0.000
estExt_fgenesh2_kg.C_101139
Serpula lacrymans
estExt_fgenesh2_kg.C_101139
N
0.000
estExt_fgenesh2_kg.C_60140
Agaricus bisporus
estExt_fgenesh2_kg.C_60140
N
0.000
estExt_Genewise1Plus.C_60119
Heterobasidion annosum
estExt_Genewise1Plus.C_60119
N
0.000
genemark.4513_g
Pleurotus ostreatus
genemark.4513_g
N
0.000