estExt_Genewise1Plus.C_1900018 (Postia placenta)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 estExt_Genewise1Plus.C_1900018 T61162_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_1900018 S1 78 157

Links

Other S1 family RBPs
Other Postia placenta RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh3_pm.29__13 Postia placenta fgenesh3_pm.29__13 N 1.000
CC1G_04529 Coprinopsis cinerea CC1G_04529 N 0.975
estExt_fgenesh2_kg.C_101139 Serpula lacrymans estExt_fgenesh2_kg.C_101139 N 0.963
estExt_Genewise1Plus.C_60119 Heterobasidion annosum estExt_Genewise1Plus.C_60119 N 0.963
genemark.4513_g Pleurotus ostreatus genemark.4513_g N 0.938
estExt_fgenesh2_pg.C_250108 Laccaria bicolor estExt_fgenesh2_pg.C_250108 N 0.938
fgenesh2_pg.4_#_679 Schizophyllum commune fgenesh2_pg.4_#_679 N 0.925
estExt_fgenesh2_kg.C_60140 Agaricus bisporus estExt_fgenesh2_kg.C_60140 N 0.925
e_gww2.6.559.1 Phanerochaete chrysosporium e_gww2.6.559.1 N 0.912
PredSwiss_CON2711.1 Pneumocystis carinii PredSwiss_CON2711.1 N 0.732
PGTG_17668 Puccinia graminis PGTG_17668 N 0.720
e_gw1.10.249.1 Sporobolomyces roseus e_gw1.10.249.1 N 0.716
SJAG_01436 Schizosaccharomyces japonicus SJAG_01436 N 0.713
PredSwiss_ASS2010_1331.1 Pneumocystis carinii PredSwiss_ASS2010_1331.1 N 0.713
estExt_Genewise1Plus.C_510049 Melampsora laricis populina estExt_Genewise1Plus.C_510049 N 0.707
estExt_Genewise1Plus.C_31798 Mucor circinelloides estExt_Genewise1Plus.C_31798 N 0.700
SPOG_03808 Schizosaccharomyces cryophilus SPOG_03808 N 0.700