scaffold_30000002.1 (Arabidopsis lyrata)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 scaffold_30000002.1 T04143_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
scaffold_30000002.1 CCCH ZF 15 40

Links

Other CCCH ZF family RBPs
Other Arabidopsis lyrata RBPs

159 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000003248 Ciona intestinalis ENSCING00000003248 N 0.000
LOC100062520 Equus caballus ENSECAG00000004701 N 0.000
ENSMEUG00000014025 Macropus eugenii ENSMEUG00000014025 N 0.000
ENSMGAG00000004139 Meleagris gallopavo ENSMGAG00000004139 N 0.000
Cstf2 Mus musculus ENSMUSG00000031256 N 0.000
CSTF2 Ochotona princeps ENSOPRG00000003106 N 0.000
CSTF2 Spermophilus tridecemlineatus ENSSTOG00000001797 N 0.000
cassava22174.valid.m1 Manihot esculenta cassava22174.valid.m1 N 0.000