cassava22174.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava22174.valid.m1 T49177_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava22174.valid.m1 RRM 32 75

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PDK_20s1489112g001 Phoenix dactylifera PDK_20s1489112g001 N 0.875
GRMZM2G437315 Zea mays GRMZM2G437315 N 0.841
B9GT48_POPTR Populus trichocarpa POPTR_0002s06200 N 0.840
GRMZM2G536584 Zea mays GRMZM2G536584 N 0.818
PDK_20s1316271g001 Phoenix dactylifera PDK_20s1316271g001 N 0.788
GRMZM2G453025 Zea mays GRMZM2G453025 N 0.755
ENSMGAG00000004139 Meleagris gallopavo ENSMGAG00000004139 N 0.750
CSTF2 Otolemur garnettii ENSOGAG00000011192 N 0.717
CSTF2 Spermophilus tridecemlineatus ENSSTOG00000001797 N 0.717
CSTF2 Ochotona princeps ENSOPRG00000003106 N 0.717