cassava30352.valid.m1 (Manihot esculenta)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 cassava30352.valid.m1 T04790_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava30352.valid.m1 CCCH ZF 481 506
cassava30352.valid.m1 CCCH ZF 510 535
cassava30352.valid.m1 CCCH ZF 539 561

Links

Other CCCH ZF family RBPs
Other Manihot esculenta RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK20740.1 Cannabis sativa PK20740.1 N 0.747
GSVIVG00015184001 Vitis vinifera GSVIVG00015184001 N 0.720
29838.m001638 Ricinus communis 29838.m001638 N 0.813
Cucsa.018350 Cucumis sativus Cucsa.018350 N 0.707
ppa001043m Prunus persica ppa001043m N 0.707