ppa001043m (Prunus persica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ppa001043m T06501_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa001043m CCCH ZF 538 563
ppa001043m CCCH ZF 567 592
ppa001043m CCCH ZF 596 618

Links

Other CCCH ZF family RBPs
Other Prunus persica RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK20740.1 Cannabis sativa PK20740.1 N 0.787
GSVIVG00015184001 Vitis vinifera GSVIVG00015184001 N 0.733
Cucsa.018350 Cucumis sativus Cucsa.018350 N 0.707
cassava30352.valid.m1 Manihot esculenta cassava30352.valid.m1 N 0.707
XM_002866127.1 Arabidopsis lyrata scaffold_802252.1 N 0.707
29838.m001638 Ricinus communis 29838.m001638 N 0.707