PK20740.1 (Cannabis sativa)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PK20740.1 T01770_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK20740.1 CCCH ZF 542 567
PK20740.1 CCCH ZF 571 596
PK20740.1 CCCH ZF 600 622

Links

Other CCCH ZF family RBPs
Other Cannabis sativa RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa001043m Prunus persica ppa001043m N 0.787
29838.m001638 Ricinus communis 29838.m001638 N 0.760
Cucsa.018350 Cucumis sativus Cucsa.018350 N 0.747
cassava30352.valid.m1 Manihot esculenta cassava30352.valid.m1 N 0.747
GSVIVG00015184001 Vitis vinifera GSVIVG00015184001 N 0.747
Glyma14g39390.1 Glycine max Glyma14g39390.1 N 0.720
B9HDY4_POPTR Populus trichocarpa POPTR_0006s15080 N 0.707