Glyma15g42750.1 (Glycine max)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 Glyma15g42750.1 T05456_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma15g42750.1 CCCH ZF 2 26
Glyma15g42750.1 CCCH ZF 32 55
Glyma15g42750.1 CCCH ZF 144 167
Glyma15g42750.1 CCCH ZF 299 325

Links

Other CCCH ZF family RBPs
Other Glycine max RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CC1G_00173 Coprinopsis cinerea CC1G_00173 N 0.000
estExt_GeneWisePlus_human.C_40675 Laccaria bicolor estExt_GeneWisePlus_human.C_40675 N 0.000
fgenesh1_pm.C_scaffold_1000427 Schizophyllum commune fgenesh1_pm.C_scaffold_1000427 N 0.000
EDP43472.1 Malassezia globosa EDP43472.1 N 0.000
estExt_fgenesh2_kg.C_40528 Agaricus bisporus estExt_fgenesh2_kg.C_40528 N 0.000
estExt_fgenesh2_pm.C_40077 Heterobasidion annosum estExt_fgenesh2_pm.C_40077 N 0.000
genemark.5060_g Pleurotus ostreatus genemark.5060_g N 0.000