fgenesh1_pm.C_scaffold_1000427 (Schizophyllum commune)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_1000427 T52062_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_1000427 RRM 17 84

Links

Other RRM family RBPs
Other Schizophyllum commune RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pm.C_40077 Heterobasidion annosum estExt_fgenesh2_pm.C_40077 N 0.985
genemark.5060_g Pleurotus ostreatus genemark.5060_g N 0.971
fgenesh1_pg.C_scaffold_2000586 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000586 N 0.956
estExt_fgenesh2_kg.C_41881 Serpula lacrymans estExt_fgenesh2_kg.C_41881 N 0.956
fgenesh3_pg.17__64 Postia placenta fgenesh3_pg.17__64 N 0.956
estExt_fgenesh2_kg.C_40528 Agaricus bisporus estExt_fgenesh2_kg.C_40528 N 0.956
estExt_GeneWisePlus_human.C_40675 Laccaria bicolor estExt_GeneWisePlus_human.C_40675 N 0.941
CC1G_00173 Coprinopsis cinerea CC1G_00173 N 0.912
EuGene.00070081 Melampsora laricis populina EuGene.00070081 N 0.809
PGTG_00327 Puccinia graminis PGTG_00327 N 0.794
e_gw1.6.621.1 Sporobolomyces roseus e_gw1.6.621.1 N 0.779
PTTG_08563 Puccinia triticina PTTG_08563 N 0.754
UM02609 Ustilago maydis UM02609 N 0.721
EDP43472.1 Malassezia globosa EDP43472.1 N 0.721
CNBG_4700 Cryptococcus neoformans CNBG_4700 N 0.714