BGIBMGA011920 (Bombyx mori)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 BGIBMGA011920 T05854_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA011920 CCCH ZF 38 62
BGIBMGA011920 CCCH ZF 64 89
BGIBMGA011920 CCCH ZF 92 117
BGIBMGA011920 CCCH ZF 120 143
BGIBMGA011920 CCCH ZF 145 169

Links

Other CCCH ZF family RBPs
Other Bombyx mori RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cpsf4 Mus musculus ENSMUSG00000029625 N 0.758
CPSF4_RAT Rattus norvegicus ENSRNOG00000000985 N 0.758
CPSF4 Callithrix jacchus ENSCJAG00000015826 N 0.758
CPSF4 Echinops telfairi ENSETEG00000002608 N 0.719
CPSF4 Felis catus ENSFCAG00000015070 N 0.758
CPSF4 Tursiops truncatus ENSTTRG00000003007 N 0.758
PHUM519380 Pediculus humanus PHUM519380 N 0.865
gw.91.110.1 Nematostella vectensis gw.91.110.1 N 0.754
Ame_R012658 Ailuropoda melanoleuca Ame_R012658 N 0.758