gw.91.110.1 (Nematostella vectensis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 gw.91.110.1 T05573_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw.91.110.1 CCCH ZF 38 60
gw.91.110.1 CCCH ZF 63 87
gw.91.110.1 CCCH ZF 91 116
gw.91.110.1 CCCH ZF 119 142
gw.91.110.1 CCCH ZF 144 168

Links

Other CCCH ZF family RBPs
Other Nematostella vectensis RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPSF4 Felis catus ENSFCAG00000015070 N 0.794
CPSF4 Tursiops truncatus ENSTTRG00000003007 N 0.794
CPSF4_RAT Rattus norvegicus ENSRNOG00000000985 N 0.794
CPSF4 Callithrix jacchus ENSCJAG00000015826 N 0.794
Ame_R012658 Ailuropoda melanoleuca Ame_R012658 N 0.794
Cpsf4 Mus musculus ENSMUSG00000029625 N 0.794
PHUM519380 Pediculus humanus PHUM519380 N 0.784
CPSF4 Echinops telfairi ENSETEG00000002608 N 0.762
BGIBMGA011920 Bombyx mori BGIBMGA011920 N 0.754
ENSTSYG00000008195 Tarsius syrichta ENSTSYG00000008195 N 0.722