CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBBP6
(
Anolis carolinensis
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSACAG00000011794
T09965_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000011585
CCHC ZF
105
121
TCFRCGKPGHYIKICPT
Links
Other
CCHC ZF
family RBPs
Other
Anolis carolinensis
RBPs
51 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R017990
Ailuropoda melanoleuca
Ame_R017990
N
0.941
RBBP6
Sorex araneus
ENSSARG00000004977
N
0.941
Rbbp6
Rattus norvegicus
ENSRNOG00000012806
N
0.941
RBBP6
Pteropus vampyrus
ENSPVAG00000001110
N
0.941
RBBP6
Pan troglodytes
ENSPTRG00000007897
N
0.941
ENSPPYG00000007201
Pongo pygmaeus
ENSPPYG00000007201
N
0.941
RBBP6
Oryzias latipes
ENSORLG00000012764
N
0.706
ENSORLG00000008630
Oryzias latipes
ENSORLG00000008630
N
0.765
RBBP6
Ochotona princeps
ENSOPRG00000016272
N
0.941
RBBP6
Oryctolagus cuniculus
ENSOCUG00000004346
N
0.941
RBBP6
Ornithorhynchus anatinus
ENSOANG00000007673
N
0.941
RBBP6
Sus scrofa
ENSSSCG00000007830
N
0.941
RBBP6
Spermophilus tridecemlineatus
ENSSTOG00000016006
N
0.941
RBBP6
Taeniopygia guttata
ENSTGUG00000006185
N
0.941
s_441997
Phytophthora sojae
s_441997
N
0.706
fgenesh1_pg.C_scaffold_47000011
Phytophthora ramorum
fgenesh1_pg.C_scaffold_47000011
N
0.706
e_gw.4.464.1
Branchiostoma floridae
e_gw.4.464.1
N
0.706
EHI_014000
Entamoeba histolytica
EHI_014000
N
0.706
EDI_353070
Entamoeba dispar
EDI_353070
N
0.706
RBBP6
Vicugna pacos
ENSVPAG00000006458
N
0.941
RBBP6
Tursiops truncatus
ENSTTRG00000002696
N
0.941
RBBP6
Tarsius syrichta
ENSTSYG00000000822
N
0.941
ENSTRUG00000009471
Takifugu rubripes
ENSTRUG00000009471
N
0.706
ENSTNIG00000005451
Tetraodon nigroviridis
ENSTNIG00000005451
N
0.706
Rbbp6
Mus musculus
ENSMUSG00000030779
N
0.941
ENSMODG00000024435
Monodelphis domestica
ENSMODG00000024435
N
0.941
ENSMODG00000024434
Monodelphis domestica
ENSMODG00000024434
N
0.941
Q866R2_HORSE
Equus caballus
ENSECAG00000014572
N
0.941
ENSDORG00000010285
Dipodomys ordii
ENSDORG00000010285
N
0.941
RBBP6
Dasypus novemcinctus
ENSDNOG00000015497
N
0.941
rbbp6l
Danio rerio
ENSDARG00000037919
N
0.824
LOC100395616
Callithrix jacchus
ENSCJAG00000020661
N
0.941
RBBP6
Choloepus hoffmanni
ENSCHOG00000000278
N
0.941
RBBP6
Canis familiaris
ENSCAFG00000017566
N
0.941
RBBP6
Bos taurus
ENSBTAG00000009441
N
0.941
AAEL002729
Aedes aegypti
AAEL002729
N
0.706
UM00321
Ustilago maydis
UM00321
N
0.765
RBBP6
Erinaceus europaeus
ENSEEUG00000001683
N
0.941
RBBP6
Homo sapiens
ENSG00000122257
N
0.941
RBBP6
Gasterosteus aculeatus
ENSGACG00000016781
N
0.765
ENSMODG00000024432
Monodelphis domestica
ENSMODG00000024432
N
0.941
ENSMODG00000016318
Monodelphis domestica
ENSMODG00000016318
N
0.941
RBBP6
Macaca mulatta
ENSMMUG00000015908
N
0.941
RBBP6
Myotis lucifugus
ENSMLUG00000010601
N
0.941
RBBP6
Microcebus murinus
ENSMICG00000008059
N
0.941
RBBP6
Meleagris gallopavo
ENSMGAG00000006423
N
0.941
RBBP6
Macropus eugenii
ENSMEUG00000014491
N
0.941
RBBP6
Loxodonta africana
ENSLAFG00000009528
N
0.941
RBBP6
Gorilla gorilla
ENSGGOG00000007137
N
0.941
RBBP6
Gallus gallus
ENSGALG00000006043
N
0.941
PITG_10087
Phytophthora infestans
PITG_10087
N
0.706