CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL002729
(
Aedes aegypti
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
AAEL002729
T09265_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL002729-PA
CCHC ZF
23
39
KCFRCNKPGHWIKNCPL
Links
Other
CCHC ZF
family RBPs
Other
Aedes aegypti
RBPs
51 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AGAP011217
Anopheles gambiae
AGAP011217
N
0.882
CpipJ_CPIJ008053
Culex pipiens
CpipJ_CPIJ008053
N
0.882
CPIJ008053
Culex quinquefasciatus
CPIJ008053
N
0.882
nasonia_NCBI_hmm206094
Nasonia vitripennis
nasonia_NCBI_hmm206094
N
0.778
ENSPPYG00000007201
Pongo pygmaeus
ENSPPYG00000007201
N
0.765
RBBP6
Pteropus vampyrus
ENSPVAG00000001110
N
0.765
RBBP6
Ochotona princeps
ENSOPRG00000016272
N
0.765
RBBP6
Pan troglodytes
ENSPTRG00000007897
N
0.765
Rbbp6
Mus musculus
ENSMUSG00000030779
N
0.765
ENSMODG00000024435
Monodelphis domestica
ENSMODG00000024435
N
0.765
Rbbp6
Rattus norvegicus
ENSRNOG00000012806
N
0.765
RBBP6
Oryctolagus cuniculus
ENSOCUG00000004346
N
0.765
RBBP6
Sus scrofa
ENSSSCG00000007830
N
0.765
RBBP6
Tursiops truncatus
ENSTTRG00000002696
N
0.765
RBBP6
Vicugna pacos
ENSVPAG00000006458
N
0.765
Ame_R017990
Ailuropoda melanoleuca
Ame_R017990
N
0.765
RBBP6
Tarsius syrichta
ENSTSYG00000000822
N
0.765
RBBP6
Taeniopygia guttata
ENSTGUG00000006185
N
0.765
ENSMODG00000024434
Monodelphis domestica
ENSMODG00000024434
N
0.765
RBBP6
Spermophilus tridecemlineatus
ENSSTOG00000016006
N
0.765
RBBP6
Sorex araneus
ENSSARG00000004977
N
0.765
RBBP6
Ornithorhynchus anatinus
ENSOANG00000007673
N
0.765
ENSDORG00000010285
Dipodomys ordii
ENSDORG00000010285
N
0.765
Q866R2_HORSE
Equus caballus
ENSECAG00000014572
N
0.765
RBBP6
Erinaceus europaeus
ENSEEUG00000001683
N
0.765
ENSMODG00000024432
Monodelphis domestica
ENSMODG00000024432
N
0.765
LOC100395616
Callithrix jacchus
ENSCJAG00000020661
N
0.765
RBBP6
Bos taurus
ENSBTAG00000009441
N
0.765
RBBP6
Canis familiaris
ENSCAFG00000017566
N
0.765
RBBP6
Choloepus hoffmanni
ENSCHOG00000000278
N
0.765
RBBP6
Homo sapiens
ENSG00000122257
N
0.765
RBBP6
Dasypus novemcinctus
ENSDNOG00000015497
N
0.765
RBBP6
Gallus gallus
ENSGALG00000006043
N
0.765
RBBP6
Macaca mulatta
ENSMMUG00000015908
N
0.765
ENSMODG00000016318
Monodelphis domestica
ENSMODG00000016318
N
0.765
RBBP6
Microcebus murinus
ENSMICG00000008059
N
0.765
RBBP6
Myotis lucifugus
ENSMLUG00000010601
N
0.765
RBBP6
Loxodonta africana
ENSLAFG00000009528
N
0.765
RBBP6
Gorilla gorilla
ENSGGOG00000007137
N
0.765
RBBP6
Meleagris gallopavo
ENSMGAG00000006423
N
0.765
RBBP6
Macropus eugenii
ENSMEUG00000014491
N
0.765
nasonia_NCBI_hmm312174
Nasonia vitripennis
nasonia_NCBI_hmm312174
N
0.722
DGIL_AUG5s1501g15p2t1
Acyrtosiphon pisum
DGIL_AUG5s1501g15p2t1
N
0.706
amel4_ncbi_hmm4691
Apis mellifera
amel4_ncbi_hmm4691
N
0.706
nasonia_NCBI_hmm348274
Nasonia vitripennis
nasonia_NCBI_hmm348274
N
0.706
RBBP6
Anolis carolinensis
ENSACAG00000011794
N
0.706
NCBI_GNO_0100356
Daphnia pulex
NCBI_GNO_0100356
N
0.706
estExt_fgenesh1_pg.C_90130
Micromonas pusilla
estExt_fgenesh1_pg.C_90130
N
0.706
fgenesh1_pg.chr_8_#_187
Ostreococcus RCC809
fgenesh1_pg.chr_8_#_187
N
0.706
1200010065
Ostreococcus tauri
1200010065
N
0.706
UM00321
Ustilago maydis
UM00321
N
0.706