LOC_Os04g16649 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g16649 T11211_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g16649.1 CCHC ZF 192 209

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.000
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.000
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.000
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.000
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.000
ISCW016289 Ixodes scapularis ISCW016289 I 0.000
FBgn0262737 Drosophila melanogaster FBgn0262737 N 0.000
GE22592 Drosophila yakuba FBgn0239809 N 0.000
GJ11921 Drosophila virilis FBgn0199174 N 0.000
GI13561 Drosophila mojavensis FBgn0136316 N 0.000
GH14429 Drosophila grimshawi FBgn0121905 N 0.000
GG16232 Drosophila erecta FBgn0108467 N 0.000
GA20351-RA Drosophila pseudoobscura FBgn0080346 N 0.000
AGAP004942 Anopheles gambiae AGAP004942 N 0.000
BGIBMGA012503 Bombyx mori BGIBMGA012503 N 0.000