XP_001178848.1 (Strongylocentrotus purpuratus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 XP_001178848.1 T16327_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001178848.1 CCHC ZF 337 354

Links

Other CCHC ZF family RBPs
Other Strongylocentrotus purpuratus RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_001190095.1 Strongylocentrotus purpuratus XP_001190095.1 N 1.000
LOC_Os08g16510 Oryza sativa LOC_Os08g16510 N 0.778
LOC_Os08g19510 Oryza sativa LOC_Os08g19510 N 0.778
LOC_Os08g19570 Oryza sativa LOC_Os08g19570 N 0.778
LOC_Os08g11860 Oryza sativa LOC_Os08g11860 N 0.778
LOC_Os08g10370 Oryza sativa LOC_Os08g10370 N 0.778
LOC_Os07g33170 Oryza sativa LOC_Os07g33170 N 0.778
LOC_Os07g45850 Oryza sativa LOC_Os07g45850 N 0.778
LOC_Os08g20700 Oryza sativa LOC_Os08g20700 N 0.778
LOC_Os08g11740 Oryza sativa LOC_Os08g11740 N 0.778
LOC_Os09g01010 Oryza sativa LOC_Os09g01010 N 0.778
LOC_Os11g26370 Oryza sativa LOC_Os11g26370 N 0.778
LOC_Os11g27950 Oryza sativa LOC_Os11g27950 N 0.778
LOC_Os12g18310 Oryza sativa LOC_Os12g18310 N 0.778
LOC_Os12g24940 Oryza sativa LOC_Os12g24940 N 0.778
LOC_Os11g26270 Oryza sativa LOC_Os11g26270 N 0.778
LOC_Os11g17180 Oryza sativa LOC_Os11g17180 N 0.778
LOC_Os10g03020 Oryza sativa LOC_Os10g03020 N 0.778
LOC_Os10g18970 Oryza sativa LOC_Os10g18970 N 0.778
LOC_Os10g24290 Oryza sativa LOC_Os10g24290 N 0.778
bhlh128 Oryza sativa LOC_Os07g13000 N 0.778
LOC_Os06g36900 Oryza sativa LOC_Os06g36900 N 0.778
LOC_Os02g30000 Oryza sativa LOC_Os02g30000 N 0.778
LOC_Os03g61370 Oryza sativa LOC_Os03g61370 N 0.778
LOC_Os04g04820 Oryza sativa LOC_Os04g04820 N 0.778
LOC_Os02g27930 Oryza sativa LOC_Os02g27930 N 0.778
LOC_Os01g38058 Oryza sativa LOC_Os01g38058 N 0.778
13113.t00051 Oryza sativa 13113.t00051 N 0.778
LOC_Os01g38049 Oryza sativa LOC_Os01g38049 N 0.778
LOC_Os04g07730 Oryza sativa LOC_Os04g07730 N 0.778
LOC_Os04g05340 Oryza sativa LOC_Os04g05340 N 0.778
LOC_Os05g17900 Oryza sativa LOC_Os05g17900 N 0.778
LOC_Os05g20490 Oryza sativa LOC_Os05g20490 N 0.778
LOC_Os05g17340 Oryza sativa LOC_Os05g17340 N 0.778
LOC_Os04g16649 Oryza sativa LOC_Os04g16649 N 0.778
LOC_Os04g15999 Oryza sativa LOC_Os04g15999 N 0.778
LOC_Os05g25740 Oryza sativa LOC_Os05g25740 N 0.778
LOC_Os05g44500 Oryza sativa LOC_Os05g44500 N 0.778
CBG24692 Caenorhabditis briggsae CBG24692 N 0.722
LOC_Os02g29690 Oryza sativa LOC_Os02g29690 N 0.722
LOC_Os09g03060 Oryza sativa LOC_Os09g03060 N 0.722
LOC_Os06g14990 Oryza sativa LOC_Os06g14990 N 0.722