cassava45216.m1 (Manihot esculenta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 cassava45216.m1 T13444_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava45216.m1 CCHC ZF 283 297

Links

Other CCHC ZF family RBPs
Other Manihot esculenta RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava16460.m1 Manihot esculenta cassava16460.m1 N 0.722
cassava9497.m1 Manihot esculenta cassava9497.m1 N 0.800
cassava9322.m1 Manihot esculenta cassava9322.m1 N 0.722
cassava4845.m1 Manihot esculenta cassava4845.m1 N 0.778
cassava44276.m1 Manihot esculenta cassava44276.m1 N 0.722
cassava38772.m1 Manihot esculenta cassava38772.m1 N 0.867
cassava38767.m1 Manihot esculenta cassava38767.m1 N 0.722
cassava34578.m1 Manihot esculenta cassava34578.m1 N 0.778
cassava33793.m1 Manihot esculenta cassava33793.m1 N 0.933
cassava33153.m1 Manihot esculenta cassava33153.m1 N 0.722
Genemark.10353_g Serpula lacrymans Genemark.10353_g N 0.733