cassava9497.m1 (Manihot esculenta)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 cassava9497.m1 T13476_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava9497.m1 CCHC ZF 358 372

Links

Other CCHC ZF family RBPs
Other Manihot esculenta RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava33793.m1 Manihot esculenta cassava33793.m1 N 0.867
cassava45216.m1 Manihot esculenta cassava45216.m1 N 0.800
cassava38772.m1 Manihot esculenta cassava38772.m1 N 0.800
cassava9322.m1 Manihot esculenta cassava9322.m1 N 0.778
cassava4845.m1 Manihot esculenta cassava4845.m1 N 0.722
cassava4349.m1 Manihot esculenta cassava4349.m1 N 0.722
cassava34578.m1 Manihot esculenta cassava34578.m1 N 0.722