CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.2815_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.2815_g
T15719_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.2815_g
CCHC ZF
257
271
GSCYNCGQEGHMSRD
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
cassava24191.valid.m1
Manihot esculenta
cassava24191.valid.m1
N
0.000
Cucsa.116130
Cucumis sativus
Cucsa.116130
N
0.000
Glyma05g08160.1
Glycine max
Glyma05g08160.1
N
0.000
Glyma17g12730.1
Glycine max
Glyma17g12730.1
N
0.000
MDP0000231316
Malus x domestica
MDP0000231316
N
0.000
ppa007582m
Prunus persica
ppa007582m
N
0.000