ENSCJAG00000009207 (Callithrix jacchus)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSCJAG00000009207 T16781_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YB-1
M111_0.6 		Homo sapiens AACAUCD RNAcompete
Ray et al.(2013)
RNCMPT00116 		0.732
YB-1
M081_0.6 		Homo sapiens AACAUC RNAcompete
Ray et al.(2013)
RNCMPT00083 		0.732
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000016849 CSD 16 86

Links

Other CSD family RBPs
Other Callithrix jacchus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CG3808 Drosophila melanogaster FBgn0036838 N 0.000
GJ13518 Drosophila virilis FBgn0200742 N 0.000
GD12311 Drosophila simulans FBgn0184044 N 0.000
GM14902 Drosophila sechellia FBgn0169823 N 0.000
GL21966 Drosophila persimilis FBgn0159559 N 0.000
GI11815 Drosophila mojavensis FBgn0134574 N 0.000
GH16956 Drosophila grimshawi FBgn0124427 N 0.000
GG13433 Drosophila erecta FBgn0105705 N 0.000
GF10790 Drosophila ananassae FBgn0087830 N 0.000
GE22531 Drosophila yakuba FBgn0239750 N 0.000