fxr2 (Danio rerio)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDARG00000016260 T18615_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.779
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000004667 KH 220 279
ENSDARP00000004667 KH 283 367

Links

Other KH family RBPs
Other Danio rerio RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPC1 Homo sapiens ENSG00000070756 D 0.000
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.000
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.000
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.000
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.000
PABPC4 Taeniopygia guttata ENSTGUG00000001266 I 0.000
PABPC3 Takifugu rubripes ENSTRUG00000011577 I 0.000
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.000
ISCW014211 Ixodes scapularis ISCW014211 I 0.000
XP_001177907.1 Strongylocentrotus purpuratus XP_001177907.1 I 0.000
XP_801795.2 Strongylocentrotus purpuratus XP_801795.2 I 0.000
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.000
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.000
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.000
pabpc1a Danio rerio ENSDARG00000017219 I 0.000
PABPC3 Gasterosteus aculeatus ENSGACG00000003572 I 0.000
PABPC4 Gallus gallus ENSGALG00000003800 I 0.000
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.000
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.000
ENSOANG00000010001 Ornithorhynchus anatinus ENSOANG00000010001 I 0.000
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.000
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.000
AAH73435 Xenopus laevis AAH73435 I 0.000