CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DDX43
(
Erinaceus europaeus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSEEUG00000008838
T18728_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000008046
KH
68
126
LCFEVKNDCVGAVIGRGGSKIRDIQSTTNTKVQIIKGYPTAEVKIFGSKAMQTKAKAII
Links
Other
KH
family RBPs
Other
Erinaceus europaeus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DDX43
Cavia porcellus
ENSCPOG00000003991
N
0.710
DDX43
Spermophilus tridecemlineatus
ENSSTOG00000014691
N
0.712
DDX43
Pan troglodytes
ENSPTRG00000018344
N
0.712
ENSOCUG00000006338
Oryctolagus cuniculus
ENSOCUG00000006338
N
0.763
Ddx43
Mus musculus
ENSMUSG00000070291
N
0.780
DDX43
Macaca mulatta
ENSMMUG00000019599
N
0.729
DDX43
Loxodonta africana
ENSLAFG00000012755
N
0.787
DDX43
Homo sapiens
ENSG00000080007
N
0.712
DDX43
Echinops telfairi
ENSETEG00000001887
N
0.746
DDX43
Vicugna pacos
ENSVPAG00000004969
N
0.729