CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSOCUG00000006338
(
Oryctolagus cuniculus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOCUG00000006338
T19187_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000005485
KH
60
118
LCFDLKSELVGAVIGRGGSKIKEIQSRTNTKIQIIKGTPNSEVKIFGSKTMQTKAKAVI
ENSOCUP00000019339
KH
69
127
LCFDLKSELVGAVIGRGGSKIKEIQSRTNTKIQIIKGTPNSEVKIFGSKTMQTKAKAVI
Links
Other
KH
family RBPs
Other
Oryctolagus cuniculus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DDX43
Cavia porcellus
ENSCPOG00000003991
N
0.710
DDX43
Pan troglodytes
ENSPTRG00000018344
N
0.780
ENSPPYG00000016774
Pongo pygmaeus
ENSPPYG00000016774
N
0.746
Ddx43
Mus musculus
ENSMUSG00000070291
N
0.712
DDX43
Macaca mulatta
ENSMMUG00000019599
N
0.746
DDX43
Loxodonta africana
ENSLAFG00000012755
N
0.770
DDX43
Homo sapiens
ENSG00000080007
N
0.780
DDX43
Echinops telfairi
ENSETEG00000001887
N
0.729
DDX43
Erinaceus europaeus
ENSEEUG00000008838
N
0.763
DDX43
Spermophilus tridecemlineatus
ENSSTOG00000014691
N
0.729