CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ARB_07066
(
Arthroderma benhamiae
)
PUF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00806 (PUF)
IPR001313
ARB_07066
T23751_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ARB_07066
PUF
669
702
YSGEIYGMCKDQHGCRYLQRKLEEGVPEHVQIIF
ARB_07066
PUF
704
738
ETQMHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI
ARB_07066
PUF
741
775
AAPHLVQIALNQHGTRALQKMIEFISTPEQIQTVI
ARB_07066
PUF
777
811
ALSGQVVELVQDLNGNHVIQKCLNRLSAPDAQFIY
ARB_07066
PUF
815
847
GKECVAVGTHRHGCCVLQRCIDHASGDQRAKLI
ARB_07066
PUF
849
878
QITKSSYSLVQDPFGNYVIQYILDLGEPLF
ARB_07066
PUF
885
919
TFQGSIPALSKQKFSSNVIEKCIRTSDFNMRRAFI
ARB_07066
PUF
927
957
ELPNMLRDSFANYVIQTAMDFADPESRNTLI
Links
Other
PUF
family RBPs
Other
Arthroderma benhamiae
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRADI3G12880
Brachypodium distachyon
BRADI3G12880
N
0.000
LOC_Os08g01070
Oryza sativa
LOC_Os08g01070
N
0.000
SB07G001150
Sorghum bicolor
Sb07g001150
N
0.000