CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBCK1
(
Homo sapiens
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSG00000125826
T26468_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000254960
RanBP ZF
154
179
GWQCPGCTFINKPTRPGCEMCCRARP
ENSP00000348632
RanBP ZF
196
221
GWQCPGCTFINKPTRPGCEMCCRARP
ENSP00000371649
RanBP ZF
196
221
GWQCPGCTFINKPTRPGCEMCCRARP
ENSP00000383102
RanBP ZF
237
262
GWQCPGCTFINKPTRPGCEMCCRARP
ENSP00000383103
RanBP ZF
196
221
GWQCPGCTFINKPTRPGCEMCCRARP
ENSP00000393841
RanBP ZF
229
254
GWQCPGCTFINKPTRPGCEMCCRARP
ENSP00000405288
RanBP ZF
196
221
GWQCPGCTFINKPTRPGCEMCCRARP
Links
Other
RanBP ZF
family RBPs
Other
Homo sapiens
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PMAA_052310
Penicillium marneffei
PMAA_052310
N
0.000
estExt_Genewise1.C_180314
Trichoderma reesei
estExt_Genewise1.C_180314
N
0.000
estExt_fgenesh2_pg.C_21066
Thielavia terrestris
estExt_fgenesh2_pg.C_21066
N
0.000
estExt_fgenesh1_pg.C_40358
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_40358
N
0.000
estExt_fgenesh1_pg.C_10219
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10219
N
0.000
estExt_fgenesh1_kg.C_30108
Myceliophthora thermophila
estExt_fgenesh1_kg.C_30108
N
0.000
NCU04164
Neurospora crassa
NCU04164
N
0.000
NFIA_026460
Neosartorya fischeri
CADNFIAG00002567
N
0.000
ATEG_06451
Aspergillus terreus
CADATEAG00007044
N
0.000
AO090005000269
Aspergillus oryzae
CADAORAG00002284
N
0.000
ANIA_06676
Aspergillus nidulans
CADANIAG00007461
N
0.000
estExt_Genewise1Plus.C_12199
Neurospora discreta
estExt_Genewise1Plus.C_12199
N
0.000
estExt_Genewise1Plus.C_chr_40253
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_40253
N
0.000
estExt_Genewise1Plus.C_sca_14_chr10_3_00018
Nectria haematococca
estExt_Genewise1Plus.C_sca_14_chr10_3_00018
N
0.000
Pc12g05910
Penicillium chrysogenum
Pc12g05910
N
0.000
Pa_2_11080
Podospora anserina
Pa_2_11080
N
0.000
GSTUMT00009853001
Tuber melanosporum
GSTUMT00009853001
N
0.000
fgenesh1_pm.00771_#_149
Aspergillus carbonarius
fgenesh1_pm.00771_#_149
N
0.000
estExt_Genewise1Plus.C_130074
Cryphonectria parasitica
estExt_Genewise1Plus.C_130074
N
0.000
AB06486.1
Alternaria brassicicola
AB06486.1
N
0.000
EAT92286.2
Phaeosphaeria nodorum
EAT92286.2
N
0.000
scaffold_1-snap.352.1
Neurospora tetrasperma
scaffold_1-snap.352.1
N
0.000
gw1.13.356.1
Trichoderma atroviride
gw1.13.356.1
N
0.000
fgenesh1_pg.C_scaffold_28000022
Trichoderma virens
fgenesh1_pg.C_scaffold_28000022
N
0.000
An07g02990
Aspergillus niger
CADANGAG00005571
N
0.000
AFUA_7G05260
Aspergillus fumigatus
CADAFUAG00009507
N
0.000
AFLA_075060
Aspergillus flavus
CADAFLAG00000288
N
0.000
MCYG_05842
Microsporum canis
MCYG_05842
N
0.000
HCAG_04664
Histoplasma capsulatum
HCAG_04664
N
0.000
GLRG_01286
Colletotrichum graminicola
GLRG_01286
N
0.000
FVEG_07344
Fusarium verticillioides
FVEG_07344
N
0.000
FOXG_04224
Fusarium oxysporum
FOXG_04224
N
0.000
FGSG_01904
Fusarium graminearum
FGSG_01904
N
0.000
CPSG_07669
Coccidioides posadasii
CPSG_07669
N
0.000
CIMG_04697
Coccidioides immitis
CIMG_04697
N
0.000
CHGG_07146
Chaetomium globosum
CHGG_07146
N
0.000
BC1G_05132
Botrytis cinerea
BC1G_05132
N
0.000
MGG_07511
Magnaporthe oryzae
MGG_07511
N
0.000
MGYG_06129
Microsporum gypseum
MGYG_06129
N
0.000
PABG_06275
Paracoccidioides brasiliensis
PABG_06275
N
0.000
ACLA_006960
Aspergillus clavatus
CADACLAG00000697
N
0.000
VDBG_09339
Verticillium albo atrum
VDBG_09339
N
0.000
VDAG_04577
Verticillium dahliae
VDAG_04577
N
0.000
TRV_06236
Trichophyton verrucosum
TRV_06236
N
0.000
TESG_06970
Trichophyton tonsurans
TESG_06970
N
0.000
TERG_06272
Trichophyton rubrum
TERG_06272
N
0.000
TEQG_06803
Trichophyton equinum
TEQG_06803
N
0.000
SS1G_07495
Sclerotinia sclerotiorum
SS1G_07495
N
0.000
SNOG_00791
Stagonospora nodorum
SNOG_00791
N
0.000
PTRG_07268
Pyrenophora tritici repentis
PTRG_07268
N
0.000
ARB_04443
Arthroderma benhamiae
ARB_04443
N
0.000