CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Y25C1A.8
(
Caenorhabditis elegans
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
Y25C1A.8
T27137_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y25C1A.8a
RanBP ZF
17
41
KDGEWACVDSKCAKVNEESLLVCDE
Y25C1A.8a
RanBP ZF
71
99
AEDWVCSKCGNVNWARRRTCNVCNAPKLA
Links
Other
RanBP ZF
family RBPs
Other
Caenorhabditis elegans
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRO9
Saccharomyces cerevisiae
YCL037C
N
0.000
Skud_Contig2072.8
Saccharomyces kudriavzevii
Skud_Contig2072.8
N
0.000
2160_YCL037C
Saccharomyces mikatae
2160_YCL037C
N
0.000
2293_YCL037C
Saccharomyces paradoxus
2293_YCL037C
N
0.000
2468_Multiple
Saccharomyces bayanus
2468_Multiple
N
0.000
SAKL0C01254g
Lachancea kluyveri
SAKL0C01254g
N
0.000