CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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2160_YCL037C
(
Saccharomyces mikatae
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
2160_YCL037C
T23119_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
2160_YCL037C
La
260
319
IARQIEYYFSEENLTVDNYLRSKLSQDGFAPLSLISKFYRVVNMSFGGDENLILAALREI
Links
Other
La
family RBPs
Other
Saccharomyces mikatae
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
2293_YCL037C
Saccharomyces paradoxus
2293_YCL037C
N
0.967
SRO9
Saccharomyces cerevisiae
YCL037C
N
0.967
2468_Multiple
Saccharomyces bayanus
2468_Multiple
N
0.933
Skud_Contig2072.8
Saccharomyces kudriavzevii
Skud_Contig2072.8
N
0.933
KLTH0F01210g
Kluyveromyces thermotolerans
KLTH0F01210g
N
0.783
SAKL0C01254g
Lachancea kluyveri
SAKL0C01254g
N
0.750
A7TFA8_VANPO
Vanderwaltozyma polyspora
A7TFA8_VANPO
N
0.733
Scas_Contig579.3
Saccharomyces castellii
Scas_Contig579.3
N
0.733
A7TFF0_VANPO
Vanderwaltozyma polyspora
A7TFF0_VANPO
N
0.733
ZYRO0F17798g
Zygosaccharomyces rouxii
ZYRO0F17798g
N
0.733