CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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2293_YCL037C
(
Saccharomyces paradoxus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
2293_YCL037C
T23120_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
2293_YCL037C
La
265
324
IARQIEYYFSEENLTVDNYLRSKLSKDGFAPLSLISKFYRVVNMSFGGDTNLILAALREI
Links
Other
La
family RBPs
Other
Saccharomyces paradoxus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRO9
Saccharomyces cerevisiae
YCL037C
N
1.000
2160_YCL037C
Saccharomyces mikatae
2160_YCL037C
N
0.967
Skud_Contig2072.8
Saccharomyces kudriavzevii
Skud_Contig2072.8
N
0.950
2468_Multiple
Saccharomyces bayanus
2468_Multiple
N
0.950
KLTH0F01210g
Kluyveromyces thermotolerans
KLTH0F01210g
N
0.767
A7TFA8_VANPO
Vanderwaltozyma polyspora
A7TFA8_VANPO
N
0.750
A7TFF0_VANPO
Vanderwaltozyma polyspora
A7TFF0_VANPO
N
0.750
ZYRO0F17798g
Zygosaccharomyces rouxii
ZYRO0F17798g
N
0.750
SAKL0C01254g
Lachancea kluyveri
SAKL0C01254g
N
0.733
Scas_Contig579.3
Saccharomyces castellii
Scas_Contig579.3
N
0.717