CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FVEG_00825
(
Fusarium verticillioides
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FVEG_00825
T29330_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FVEG_00825T0
RRM
10
80
VFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAVRNLNDFEIMGRKLR
Links
Other
RRM
family RBPs
Other
Fusarium verticillioides
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CTRG_05067
Candida tropicalis
CTRG_05067
N
0.000
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.000
NOP15
Candida albicans
orf19.7050
N
0.000
Cd36_70640
Candida dubliniensis
Cd36_70640
N
0.000