CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Cd36_70640
(
Candida dubliniensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Cd36_70640
T55763_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cd36_70640
RRM
124
194
IYIGRLPSGFQESELKTYFSQFGDVINLKLARNKKTGKTKHYGFIEFDSFEVAKVAAETMNNYLLFGHLIK
Links
Other
RRM
family RBPs
Other
Candida dubliniensis
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NOP15
Candida albicans
orf19.7050
N
0.958
CTRG_05067
Candida tropicalis
CTRG_05067
N
0.873
gww1.3.1.1553.1
Pichia stipitis
gww1.3.1.1553.1
N
0.761
LELG_05128
Lodderomyces elongisporus
LELG_05128
N
0.746
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.732
CPAG_04667
Candida parapsilosis
CPAG_04667
N
0.732
CLUG_02861
Candida lusitaniae
CLUG_02861
N
0.718