LOC100395069 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000005609 T35528_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
DAZAP1
M013_0.6 		Homo sapiens UAGKWWR RNAcompete
Ray et al.(2013)
RNCMPT00013 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000010263 RRM 12 81
ENSCJAP00000010263 RRM 115 184
ENSCJAP00000010282 RRM 12 81
ENSCJAP00000010282 RRM 115 184
ENSCJAP00000010286 RRM 12 81
ENSCJAP00000010286 RRM 115 184

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSPATP00005059001 Paramecium tetraurelia GSPATP00005059001 N 0.000
GSPATP00017515001 Paramecium tetraurelia GSPATP00017515001 N 0.000
GSPATP00018910001 Paramecium tetraurelia GSPATP00018910001 N 0.000
GSPATP00024551001 Paramecium tetraurelia GSPATP00024551001 N 0.000
GSPATP00038282001 Paramecium tetraurelia GSPATP00038282001 N 0.000