CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSCSAVG00000010770
(
Ciona savignyi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCSAVG00000010770
T36019_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000018336
RRM
18
88
VFVGNIPYEATEEQLKDIFSEVGNVVSFRLVFDRESGKPKGYGFAEYQDKETAMSSMRNLNGRELHGRALR
ENSCSAVP00000018337
RRM
21
91
VFVGNIPYEATEEQLKDIFSEVGNVVSFRLVFDRESGKPKGYGFAEYQDKETAMSSMRNLNGRELHGRALR
ENSCSAVP00000018338
RRM
21
91
VFVGNIPYEATEEQLKDIFSEVGNVVSFRLVFDRESGKPKGYGFAEYQDKETAMSSMRNLNGRELHGRALR
ENSCSAVP00000018339
RRM
21
91
VFVGNIPYEATEEQLKDIFSEVGNVVSFRLVFDRESGKPKGYGFAEYQDKETAMSSMRNLNGRELHGRALR
Links
Other
RRM
family RBPs
Other
Ciona savignyi
RBPs
126 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Rbm45
Dipodomys ordii
ENSDORG00000015831
N
0.000
RBM45
Echinops telfairi
ENSETEG00000013424
N
0.000
RBM45
Microcebus murinus
ENSMICG00000003787
N
0.000
RBM45
Ochotona princeps
ENSOPRG00000002626
N
0.000