CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Rbm45
(
Dipodomys ordii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDORG00000015831
T36540_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000014891
RRM
31
96
VISKYTPESVIRESFAPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACKAMEEMHGQCLGPNDT
ENSDORP00000014891
RRM
113
186
RDVEDEELTRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQAIENCDRSFR
ENSDORP00000014891
RRM
397
456
NPHPLPLDVLEDIFCRFGNLIEVYLVSGKNVGYAKYADRLSANDAIATLHGKILNGVRLK
Links
Other
RRM
family RBPs
Other
Dipodomys ordii
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM45
Echinops telfairi
ENSETEG00000013424
N
0.940
RBM45
Procavia capensis
ENSPCAG00000004338
N
0.930
RBM45
Microcebus murinus
ENSMICG00000003787
N
0.895
RBM45
Ochotona princeps
ENSOPRG00000002626
N
0.731