CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM45
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000002626
T39942_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000002420
RRM
31
96
VISKYTPESLLRERFSPFGEIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDS
ENSOPRP00000002420
RRM
113
144
RDVEDEELTRIFVMIPKSYTEEDLREKFKXXX
ENSOPRP00000002420
RRM
399
458
NPHPLPLDVLEDIFCRFGNLIEVYLVSGKNVGYAKYADRMSANDAIATLHGKILNGVRLK
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM45
Echinops telfairi
ENSETEG00000013424
N
0.741
Rbm45
Dipodomys ordii
ENSDORG00000015831
N
0.731
RBM45
Procavia capensis
ENSPCAG00000004338
N
0.730