CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000010419
T37107_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.964
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000009670
RRM
258
326
VRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALQRHKHHMGVRYI
ENSFCAP00000009670
RRM
385
431
GGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGILGKRYIE
ENSFCAP00000009670
RRM
476
548
VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKVMKERYVE
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
64 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ESRP2
Homo sapiens
ENSG00000103067
D
0.964
Q7ZY29
Xenopus laevis
Q7ZY29
I
0.704
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.722
ESRP2
Pan troglodytes
ENSPTRG00000008261
I
0.974
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.722
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
0.974
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.870
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.864
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.722
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.979
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.750
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.718
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.979
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.708
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.708
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.718
ESRP2
Pteropus vampyrus
ENSPVAG00000016626
I
0.917
AAH44002
Xenopus laevis
AAH44002
I
0.704
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.718
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
1.000
esrp1
Xenopus tropicalis
ENSXETG00000014667
I
0.704
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.722
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.984
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.721
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.718
RBM35A
Taeniopygia guttata
ENSTGUG00000011907
I
0.704
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.708
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.718
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.865
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.856
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.713
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.763
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.969
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.713
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.984
ESRP1
Equus caballus
ENSECAG00000000784
I
0.718
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.837
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.855
esrp2
Danio rerio
ENSDARG00000018814
I
0.704
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.718
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.969
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.722
ESRP2
Canis familiaris
ENSCAFG00000020320
I
1.000
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.718
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.718
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.984
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.708
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.708
ESRP2
Erinaceus europaeus
ENSEEUG00000014033
I
0.984
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.874
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.870
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.958
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.718
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.718
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.787
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.850
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.718
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.964
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.722
RBM35A
Gallus gallus
ENSGALG00000015968
I
0.704
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.718
ESRP1
Homo sapiens
ENSG00000104413
I
0.722
ESRP1
Felis catus
ENSFCAG00000009920
I
0.718
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.713