RBM35A (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000015968 T37731_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ESRP2
M141_0.6 		Homo sapiens UGGGRAD RNAcompete
Ray et al.(2013)
RNCMPT00150 		0.718
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000025683 RRM 141 210
ENSGALP00000025683 RRM 244 316
ENSGALP00000025683 RRM 363 435

Links

Other RRM family RBPs
Other Gallus gallus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ESRP1 Meleagris gallopavo ENSMGAG00000012042 I 0.981
RBM35A Taeniopygia guttata ENSTGUG00000011907 I 0.981
ESRP1 Anolis carolinensis ENSACAG00000003748 I 0.944
Q7ZY29 Xenopus laevis Q7ZY29 I 0.940
AAH44002 Xenopus laevis AAH44002 I 0.940
esrp1 Xenopus tropicalis ENSXETG00000014667 I 0.940
ESRP1 Monodelphis domestica ENSMODG00000007268 I 0.935
ESRP1 Ornithorhynchus anatinus ENSOANG00000004746 I 0.935
ESRP1 Microcebus murinus ENSMICG00000008757 I 0.931
ESRP1 Cavia porcellus ENSCPOG00000012197 I 0.931
ESRP1 Loxodonta africana ENSLAFG00000001498 I 0.931
ESRP1 Canis familiaris ENSCAFG00000009305 I 0.926
ESRP1 Felis catus ENSFCAG00000009920 I 0.926
ESRP1 Oryctolagus cuniculus ENSOCUG00000001316 I 0.926
ESRP1 Pteropus vampyrus ENSPVAG00000014513 I 0.926
LOC788414 Bos taurus ENSBTAG00000021838 I 0.926
Ame_R015210 Ailuropoda melanoleuca Ame_R015210 I 0.926
ESRP1 Equus caballus ENSECAG00000000784 I 0.926
LOC100386717 Callithrix jacchus ENSCJAG00000000043 I 0.926
ESRP1 Sus scrofa ENSSSCG00000006099 I 0.926
ESRP1 Gorilla gorilla ENSGGOG00000003627 I 0.921
ESRP1 Pan troglodytes ENSPTRG00000020430 I 0.921
ENSPPYG00000018753 Pongo pygmaeus ENSPPYG00000018753 I 0.921
ESRP1 Tarsius syrichta ENSTSYG00000006036 I 0.921
ESRP1 Homo sapiens ENSG00000104413 I 0.921
ESRP1 Tursiops truncatus ENSTTRG00000004226 I 0.921
ESRP1 Vicugna pacos ENSVPAG00000006566 I 0.917
RGD1560481 Rattus norvegicus ENSRNOG00000008184 I 0.917
Esrp1 Mus musculus ENSMUSG00000040728 I 0.917
ESRP1 Macaca mulatta ENSMMUG00000021112 I 0.912
ESRP1 Erinaceus europaeus ENSEEUG00000001673 I 0.903
esrp1 Danio rerio ENSDARG00000011245 I 0.833
esrp2 Danio rerio ENSDARG00000018814 I 0.829
ESRP2_CHICK Gallus gallus ENSGALG00000003374 I 0.819
ESRP2 Meleagris gallopavo ENSMGAG00000003943 I 0.819
RBM35B Taeniopygia guttata ENSTGUG00000006986 I 0.819
ESRP2 Anolis carolinensis ENSACAG00000009900 I 0.815
ESRP2 Macropus eugenii ENSMEUG00000014322 I 0.810
ESRP2 Gasterosteus aculeatus ENSGACG00000016359 N 0.793
ESRP2 Monodelphis domestica ENSMODG00000005183 I 0.782
ESRP1 Ochotona princeps ENSOPRG00000010595 N 0.778
ESRP2 Procavia capensis ENSPCAG00000005215 I 0.778
ESRP2 Ornithorhynchus anatinus ENSOANG00000010972 I 0.778
Esrp2 Dipodomys ordii ENSDORG00000000665 I 0.773
ESRP2 Echinops telfairi ENSETEG00000006068 I 0.773
ESRP2 Dasypus novemcinctus ENSDNOG00000018588 I 0.764
ESRP2 Loxodonta africana ENSLAFG00000014609 I 0.764
ESRP2 Sorex araneus ENSSARG00000014176 I 0.764
ESRP2 Myotis lucifugus ENSMLUG00000005934 I 0.764
Esrp1 Dipodomys ordii ENSDORG00000011987 N 0.759
ESRP2 Ochotona princeps ENSOPRG00000013401 I 0.759
Esrp2 Rattus norvegicus ENSRNOG00000023177 I 0.759
ESRP1 Myotis lucifugus ENSMLUG00000001816 N 0.755
ESRP1 Tetraodon nigroviridis ENSTNIG00000018367 N 0.748
ESRP1 Takifugu rubripes ENSTRUG00000009287 N 0.748
ESRP2 Homo sapiens ENSG00000103067 D 0.718
ESRP2 Gorilla gorilla ENSGGOG00000010150 I 0.718
ENSPPYG00000007484 Pongo pygmaeus ENSPPYG00000007484 I 0.713
ESRP2 Pan troglodytes ENSPTRG00000008261 I 0.713
ESRP2 Macaca mulatta ENSMMUG00000021846 I 0.708
ESRP2 Oryctolagus cuniculus ENSOCUG00000001242 I 0.708
LOC100388530 Callithrix jacchus ENSCJAG00000015709 I 0.708
ESRP2 Canis familiaris ENSCAFG00000020320 I 0.704
ESRP2 Bos taurus ENSBTAG00000004375 I 0.704
Ame_R011562 Ailuropoda melanoleuca Ame_R011562 I 0.704
ESRP2 Felis catus ENSFCAG00000010419 I 0.704