SETD1B (Loxodonta africana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSLAFG00000026518 T38111_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000018673 RRM 109 176

Links

Other RRM family RBPs
Other Loxodonta africana RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q66J90 Xenopus laevis Q66J90 N 0.882
ENSRNOG00000001337 Rattus norvegicus ENSRNOG00000001337 N 0.985
SETD1A Pteropus vampyrus ENSPVAG00000011049 N 0.706
SETD1A Pan troglodytes ENSPTRG00000008024 N 0.706
ENSPPYG00000007296 Pongo pygmaeus ENSPPYG00000007296 N 0.706
SETD1A Procavia capensis ENSPCAG00000014351 N 0.706
SETD1B Oryzias latipes ENSORLG00000008435 N 0.779
SETD1A Ochotona princeps ENSOPRG00000016034 N 0.706
SETD1A Oryctolagus cuniculus ENSOCUG00000022182 N 0.706
SETD1B Oryctolagus cuniculus ENSOCUG00000017708 N 0.985
SETD1A Ornithorhynchus anatinus ENSOANG00000013155 N 0.735
ENSOANG00000006955 Ornithorhynchus anatinus ENSOANG00000006955 N 0.956
Q4G026_RAT Rattus norvegicus ENSRNOG00000019045 N 0.706
SETD1A Sorex araneus ENSSARG00000005591 N 0.706
SETD1A Sus scrofa ENSSSCG00000007782 N 0.706
AAH81016 Xenopus laevis AAH81016 N 0.882
Ame_R013286 Ailuropoda melanoleuca Ame_R013286 N 0.706
setd1b Xenopus tropicalis ENSXETG00000003760 N 0.882
SETD1A Tursiops truncatus ENSTTRG00000015493 N 0.706
SETD1A Tarsius syrichta ENSTSYG00000014425 N 0.706
SETD1B Takifugu rubripes ENSTRUG00000009533 N 0.765
SETD1A Tetraodon nigroviridis ENSTNIG00000014930 N 0.706
SETD1B Tetraodon nigroviridis ENSTNIG00000009090 N 0.809
SETD1B Taeniopygia guttata ENSTGUG00000006093 N 0.926
SETD1A Tupaia belangeri ENSTBEG00000009714 N 0.706
SETD1B Sus scrofa ENSSSCG00000009806 N 0.985
ENSMUSG00000072629 Mus musculus ENSMUSG00000072629 N 0.971
Setd1a Mus musculus ENSMUSG00000042308 N 0.706
SETD1A Echinops telfairi ENSETEG00000014170 N 0.721
SETD1B Equus caballus ENSECAG00000006549 N 0.985
ENSDARG00000078930 Danio rerio ENSDARG00000078930 N 0.794
setd1ba Danio rerio ENSDARG00000060847 N 0.794
SETD1A Cavia porcellus ENSCPOG00000025456 N 0.706
SETD1B Callithrix jacchus ENSCJAG00000016930 N 0.985
LOC100415635 Callithrix jacchus ENSCJAG00000003000 N 0.706
SETD1A Canis familiaris ENSCAFG00000016758 N 0.706
SETD1B Canis familiaris ENSCAFG00000008167 N 0.985
SETD1B Bos taurus ENSBTAG00000004172 N 0.985
SETD1A Bos taurus ENSBTAG00000002345 N 0.706
SETD1A Felis catus ENSFCAG00000002588 N 0.706
SETD1A Homo sapiens ENSG00000099381 N 0.706
SETD1B Homo sapiens ENSG00000139718 N 0.971
SETD1B Monodelphis domestica ENSMODG00000023734 N 0.941
SETD1A Monodelphis domestica ENSMODG00000001726 N 0.721
ENSMMUG00000012647 Macaca mulatta ENSMMUG00000012647 N 0.971
SETD1B Meleagris gallopavo ENSMGAG00000004421 N 0.926
SETD1A Macropus eugenii ENSMEUG00000003396 N 0.721
SETD1A Loxodonta africana ENSLAFG00000023335 N 0.706
SETD1A Gorilla gorilla ENSGGOG00000016052 N 0.706
SETD1B Gorilla gorilla ENSGGOG00000006715 N 0.971
SET1B_CHICK Gallus gallus ENSGALG00000004324 N 0.926
SETD1B Gasterosteus aculeatus ENSGACG00000017002 N 0.735
SETD1B Gasterosteus aculeatus ENSGACG00000011872 N 0.714
SETD1B Anolis carolinensis ENSACAG00000011162 N 0.956