SETD1B (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000016930 T35637_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000031174 RRM 108 175
ENSCJAP00000031182 RRM 108 175
ENSCJAP00000031192 RRM 108 175

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SETD1B Canis familiaris ENSCAFG00000008167 N 1.000
SETD1B Bos taurus ENSBTAG00000004172 N 1.000
SETD1B Oryctolagus cuniculus ENSOCUG00000017708 N 1.000
SETD1B Equus caballus ENSECAG00000006549 N 1.000
ENSRNOG00000001337 Rattus norvegicus ENSRNOG00000001337 N 1.000
SETD1B Sus scrofa ENSSSCG00000009806 N 1.000
SETD1B Loxodonta africana ENSLAFG00000026518 N 0.985
ENSMUSG00000072629 Mus musculus ENSMUSG00000072629 N 0.985
SETD1B Gorilla gorilla ENSGGOG00000006715 N 0.985
ENSMMUG00000012647 Macaca mulatta ENSMMUG00000012647 N 0.985
SETD1B Homo sapiens ENSG00000139718 N 0.985
SETD1B Anolis carolinensis ENSACAG00000011162 N 0.941
ENSOANG00000006955 Ornithorhynchus anatinus ENSOANG00000006955 N 0.941
SETD1B Monodelphis domestica ENSMODG00000023734 N 0.926
SET1B_CHICK Gallus gallus ENSGALG00000004324 N 0.912
SETD1B Meleagris gallopavo ENSMGAG00000004421 N 0.912
SETD1B Taeniopygia guttata ENSTGUG00000006093 N 0.912
AAH81016 Xenopus laevis AAH81016 N 0.897
Q66J90 Xenopus laevis Q66J90 N 0.897
setd1b Xenopus tropicalis ENSXETG00000003760 N 0.868
SETD1B Tetraodon nigroviridis ENSTNIG00000009090 N 0.824
ENSDARG00000078930 Danio rerio ENSDARG00000078930 N 0.809
setd1ba Danio rerio ENSDARG00000060847 N 0.809
SETD1B Oryzias latipes ENSORLG00000008435 N 0.794
SETD1B Takifugu rubripes ENSTRUG00000009533 N 0.779
SETD1A Ornithorhynchus anatinus ENSOANG00000013155 N 0.750
SETD1B Gasterosteus aculeatus ENSGACG00000017002 N 0.750
SETD1A Macropus eugenii ENSMEUG00000003396 N 0.735
SETD1A Monodelphis domestica ENSMODG00000001726 N 0.735
SETD1A Echinops telfairi ENSETEG00000014170 N 0.735
SETD1B Gasterosteus aculeatus ENSGACG00000011872 N 0.729
SETD1A Tarsius syrichta ENSTSYG00000014425 N 0.721
LOC100415635 Callithrix jacchus ENSCJAG00000003000 N 0.721
SETD1A Tursiops truncatus ENSTTRG00000015493 N 0.721
SETD1A Canis familiaris ENSCAFG00000016758 N 0.721
Ame_R013286 Ailuropoda melanoleuca Ame_R013286 N 0.721
SETD1A Bos taurus ENSBTAG00000002345 N 0.721
SETD1A Ochotona princeps ENSOPRG00000016034 N 0.721
SETD1A Loxodonta africana ENSLAFG00000023335 N 0.721
Setd1a Mus musculus ENSMUSG00000042308 N 0.721
SETD1A Oryctolagus cuniculus ENSOCUG00000022182 N 0.721
SETD1A Gorilla gorilla ENSGGOG00000016052 N 0.721
SETD1A Homo sapiens ENSG00000099381 N 0.721
SETD1A Cavia porcellus ENSCPOG00000025456 N 0.721
SETD1A Felis catus ENSFCAG00000002588 N 0.721
SETD1A Procavia capensis ENSPCAG00000014351 N 0.721
ENSPPYG00000007296 Pongo pygmaeus ENSPPYG00000007296 N 0.721
SETD1A Sorex araneus ENSSARG00000005591 N 0.721
SETD1A Sus scrofa ENSSSCG00000007782 N 0.721
SETD1A Tupaia belangeri ENSTBEG00000009714 N 0.721
Q4G026_RAT Rattus norvegicus ENSRNOG00000019045 N 0.721
SETD1A Pteropus vampyrus ENSPVAG00000011049 N 0.721
SETD1A Pan troglodytes ENSPTRG00000008024 N 0.721
SETD1A Takifugu rubripes ENSTRUG00000008953 N 0.706