Celf6 (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000032297 T39318_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.986
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.843
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.829
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.749
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.725
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000034840 RRM 48 117
ENSMUSP00000034840 RRM 136 204
ENSMUSP00000034840 RRM 377 447
ENSMUSP00000112403 RRM 21 89
ENSMUSP00000112403 RRM 261 331
ENSMUSP00000112755 RRM 48 117
ENSMUSP00000112755 RRM 136 204
ENSMUSP00000112755 RRM 398 468
ENSMUSP00000113196 RRM 21 89
ENSMUSP00000113196 RRM 262 332
ENSMUSP00000118556 RRM 48 117
ENSMUSP00000118556 RRM 136 177
ENSMUSP00000122167 RRM 48 119

Links

Other RRM family RBPs
Other Mus musculus RBPs

142 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTTG_10798 Puccinia triticina PTTG_10798 N 0.000
EEB89663.1 Moniliophthora perniciosa EEB89663.1 N 0.000
EEB89072.1 Moniliophthora perniciosa EEB89072.1 N 0.000
EEB89022.1 Moniliophthora perniciosa EEB89022.1 N 0.000
EEB88904.1 Moniliophthora perniciosa EEB88904.1 N 0.000
EEB88856.1 Moniliophthora perniciosa EEB88856.1 N 0.000
EEB88827.1 Moniliophthora perniciosa EEB88827.1 N 0.000
EEB88782.1 Moniliophthora perniciosa EEB88782.1 N 0.000
EEB88731.1 Moniliophthora perniciosa EEB88731.1 N 0.000
EEB89900.1 Moniliophthora perniciosa EEB89900.1 N 0.000