BRUNOL5 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000161082 T37298_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6		 Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.838
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.768
unc-75
M079_0.6 		Caenorhabditis elegans UGUUGUD RNAcompete
Ray et al.(2013)
RNCMPT00081 		0.758
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M157_0.6 RRM 47 116
M157_0.6 RRM 136 204
M157_0.6 RRM 402 472

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000292672 RRM 47 116
ENSP00000292672 RRM 136 204
ENSP00000292672 RRM 402 472
ENSP00000335182 RRM 47 116
ENSP00000335182 RRM 136 204

Links

Other RRM family RBPs
Other Homo sapiens RBPs

100 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.990
Celf5 Mus musculus ENSMUSG00000034818 N 0.971
Brunol5 Rattus norvegicus ENSRNOG00000004695 N 0.971
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.962
ACH69785 Xenopus laevis ACH69785 I 0.914
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.905
CELF5 Oryzias latipes ENSORLG00000004600 I 0.895
celf5 Danio rerio ENSDARG00000071375 I 0.890
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.876
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.871
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.871
CELF4 Oryzias latipes ENSORLG00000008913 I 0.867
Celf4 Mus musculus ENSMUSG00000024268 I 0.867
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.857
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.857
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.857
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.852
Celf6 Mus musculus ENSMUSG00000032297 I 0.843
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.843
AAH72134 Xenopus laevis AAH72134 I 0.843
AAH57704 Xenopus laevis AAH57704 I 0.843
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.843
AAA81375 Xenopus laevis AAA81375 I 0.843
Q91579 Xenopus laevis Q91579 I 0.843
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.842
CELF4 Pan troglodytes ENSPTRG00000009982 N 0.842
CELF6 Sus scrofa ENSSSCG00000001928 I 0.838
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.838
CELF6 Felis catus ENSFCAG00000016249 I 0.838
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.838
BRUNOL6 Homo sapiens ENSG00000140488 D 0.838
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.838
CELF6 Bos taurus ENSBTAG00000014092 I 0.838
HEXA Macaca mulatta ENSMMUG00000010687 I 0.838
AAH46942 Xenopus laevis AAH46942 I 0.833
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.833
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.833
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.833
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.829
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.829
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.829
Celf3 Mus musculus ENSMUSG00000028137 I 0.829
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.829
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.829
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.829
CELF3 Canis familiaris ENSCAFG00000012794 I 0.829
CELF3 Homo sapiens ENSG00000159409 I 0.829
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.829
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.829
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.829
CELF3 Equus caballus ENSECAG00000020365 I 0.829
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.829
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.829
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.825
celf3 Danio rerio ENSDARG00000034668 I 0.824
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.824
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.814
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.814
CELF6 Canis familiaris ENSCAFG00000017695 N 0.813
CELF3 Danio rerio ENSDARG00000006983 I 0.810
CELF3 Sus scrofa ENSSSCG00000006618 I 0.810
CELF3 Oryzias latipes ENSORLG00000010447 I 0.807
CELF3 Procavia capensis ENSPCAG00000001623 I 0.805
CELF5 Canis familiaris ENSCAFG00000019263 I 0.805
CELF5 Macropus eugenii ENSMEUG00000013080 I 0.801
CELF5 Pteropus vampyrus ENSPVAG00000014619 I 0.800
CELF5 Tursiops truncatus ENSTTRG00000009625 I 0.800
CELF5 Sus scrofa ENSSSCG00000013476 I 0.796
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.795
CELF5 Bos taurus ENSBTAG00000021774 I 0.791
CELF5 Gallus gallus ENSGALG00000017694 N 0.791
Bm1_27610 Brugia malayi Bm1_27610 I 0.790
Celf6 Dipodomys ordii ENSDORG00000004882 I 0.790
CELF5 Otolemur garnettii ENSOGAG00000014161 I 0.786
ACH69784 Xenopus laevis ACH69784 I 0.782
Celf5 Dipodomys ordii ENSDORG00000005915 I 0.781
BRUNOL5 Taeniopygia guttata ENSTGUG00000000514 I 0.776
CELF5 Meleagris gallopavo ENSMGAG00000001169 I 0.776
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.773
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.773
BRUNOL4 Homo sapiens ENSG00000101489 D 0.773
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.773
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.773
CELF5 Procavia capensis ENSPCAG00000002170 I 0.773
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.768
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.768
CELF5 Echinops telfairi ENSETEG00000016221 I 0.767
CRE09771 Caenorhabditis remanei CRE09771 I 0.763
CBG15358 Caenorhabditis briggsae CBG15358 I 0.763
unc-75 Caenorhabditis elegans C17D12.2 D 0.758
NCBI_GNO_7600086 Daphnia pulex NCBI_GNO_7600086 N 0.748
CELF6 Oryctolagus cuniculus ENSOCUG00000021663 I 0.743
XP_001192920.1 Strongylocentrotus purpuratus XP_001192920.1 I 0.731
XP_781047.2 Strongylocentrotus purpuratus XP_781047.2 I 0.731
CELF3 Macaca mulatta ENSMMUG00000016952 I 0.724
ENSCSAVG00000007538 Ciona savignyi ENSCSAVG00000007538 I 0.706
ENSCING00000001999 Ciona intestinalis ENSCING00000001999 I 0.706
celf4 Danio rerio ENSDARG00000070045 I 0.705
CELF4 Ochotona princeps ENSOPRG00000014415 I 0.701
CELF3 Oryzias latipes ENSORLG00000002630 I 0.701