EIF4B (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000016502 T40239_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
EIF4B
M292_0.6 		Homo sapiens SUYGGAM SELEX
Cook et al.(2011)
352_8846295 		0.843
EIF4B
M291_0.6 		Homo sapiens SUYGGAM SELEX
Cook et al.(2011)
351_8846295 		0.843
EIF4B
M290_0.6 		Homo sapiens SUYGGAM SELEX
Cook et al.(2011)
350_8846295 		0.843
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000020660 RRM 99 168

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
160995 Helobdella robusta 160995 N 0.000
177495 Helobdella robusta 177495 N 0.000
177499 Helobdella robusta 177499 N 0.000
179452 Helobdella robusta 179452 N 0.000
180343 Helobdella robusta 180343 N 0.000
180381 Helobdella robusta 180381 N 0.000
180906 Helobdella robusta 180906 N 0.000
182130 Helobdella robusta 182130 N 0.000
182469 Helobdella robusta 182469 N 0.000
182523 Helobdella robusta 182523 N 0.000
183398 Helobdella robusta 183398 N 0.000
184400 Helobdella robusta 184400 N 0.000
184490 Helobdella robusta 184490 N 0.000
176092 Helobdella robusta 176092 N 0.000
175920 Helobdella robusta 175920 N 0.000
161475 Helobdella robusta 161475 N 0.000
161499 Helobdella robusta 161499 N 0.000
161590 Helobdella robusta 161590 N 0.000
162956 Helobdella robusta 162956 N 0.000
163701 Helobdella robusta 163701 N 0.000
163780 Helobdella robusta 163780 N 0.000
163802 Helobdella robusta 163802 N 0.000
166051 Helobdella robusta 166051 N 0.000
169254 Helobdella robusta 169254 N 0.000
169322 Helobdella robusta 169322 N 0.000
174236 Helobdella robusta 174236 N 0.000
174284 Helobdella robusta 174284 N 0.000
184581 Helobdella robusta 184581 N 0.000