HNRNPA3 (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000007605 T41324_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.821
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.821
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.821
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.800
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000006889 RRM 10 79
ENSSARP00000006889 RRM 101 170

Links

Other RRM family RBPs
Other Sorex araneus RBPs

217 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.800
HNRNPA1 Homo sapiens ENSG00000135486 D 0.821
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.709
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.915
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.821
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.779
ENSPPYG00000016683 Pongo pygmaeus ENSPPYG00000016683 I 0.829
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.865
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.750
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.887
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.721
HNRNPA3 Oryzias latipes ENSORLG00000017561 I 0.754
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.836
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.821
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.821
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.771
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.730
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.844
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.745
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.750
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.793
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.859
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.915
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.915
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.821
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.821
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.779
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.814
Gm8991 Mus musculus ENSMUSG00000059179 I 0.921
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.915
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.821
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.800
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.711
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.915
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.766
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.704
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.800
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.829
ENSMMUG00000018397 Macaca mulatta ENSMMUG00000018397 I 0.702
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.908
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.747
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.814
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.800
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.807
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.821
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.814
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.807
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.800
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.773
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.814
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.807
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.800
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.821
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.704
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.716
P51992 Xenopus laevis P51992 I 0.866
AAA49741 Xenopus laevis AAA49741 I 0.771
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.738
Ame_R015370 Ailuropoda melanoleuca Ame_R015370 I 0.848
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.821
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.793
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.886
ENSTTRG00000015563 Tursiops truncatus ENSTTRG00000015563 I 0.708
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.915
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.821
Q1KKS6_FUGRU Takifugu rubripes ENSTRUG00000017504 I 0.761
Q1KKU4_FUGRU Takifugu rubripes ENSTRUG00000002190 I 0.771
AAA49742 Xenopus laevis AAA49742 I 0.771
AAA49949 Xenopus laevis AAA49949 I 0.879
AAA49950 Xenopus laevis AAA49950 I 0.866
P51968 Xenopus laevis P51968 I 0.879
P17130 Xenopus laevis P17130 I 0.771
CBU92546 Xenopus laevis CBU92546 I 0.786
CBU92451 Xenopus laevis CBU92451 I 0.866
CBU92428 Xenopus laevis CBU92428 I 0.771
CBF67672 Xenopus laevis CBF67672 I 0.786
CBF67578 Xenopus laevis CBF67578 I 0.866
CBF67555 Xenopus laevis CBF67555 I 0.771
AAI69881 Xenopus laevis AAI69881 I 0.866
AAH72090 Xenopus laevis AAH72090 I 0.786
AAH45260 Xenopus laevis AAH45260 I 0.786
HNRNPA3 Tetraodon nigroviridis ENSTNIG00000016958 I 0.757
ENSTNIG00000015047 Tetraodon nigroviridis ENSTNIG00000015047 I 0.771
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.907
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.821
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.716
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.775
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.907
ENSRNOG00000030901 Rattus norvegicus ENSRNOG00000030901 I 0.836
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.713
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.727
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.786
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.837
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.915
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.793
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.722
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.705
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.914
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.787
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.752
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.821
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.745
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.830
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.915
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.821
ENSSARG00000010620 Sorex araneus ENSSARG00000010620 I 0.700
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.743
ENSSARG00000008882 Sorex araneus ENSSARG00000008882 I 0.700
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.759
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.821
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.800
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.766
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.814
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.814
ENSCJAG00000001737 Callithrix jacchus ENSCJAG00000001737 I 0.716
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.754
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.745
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.723
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.706
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.793
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.721
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.725
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.821
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.716
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.915
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.730
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.821
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.821
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.723
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.738
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.759
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.766
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.764
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.800
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.879
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.741
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.725
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.718
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.716
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.711
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.786
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.732
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.711
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.752
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.711
LOC785445 Bos taurus ENSBTAG00000025621 I 0.801
LOC781499 Bos taurus ENSBTAG00000021580 I 0.915
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.821
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.921
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.771
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.821
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.707
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.723
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.746
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.730
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.915
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.746
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.807
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.720
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.716
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.786
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.759
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.829
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.793
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.800
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.829
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.830
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.807
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.723
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.745
ENSGGOG00000025446 Gorilla gorilla ENSGGOG00000025446 I 0.836
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.807
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.864
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.915
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.821
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.914
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.786
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.915
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.814
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.773
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.915
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.915
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.821
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.739
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.821
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.711
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.845
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.914
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.809
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.786
HNRNPA3 Gasterosteus aculeatus ENSGACG00000004477 I 0.739
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.821
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.821
hnrnpa3 Danio rerio ENSDARG00000059351 I 0.786
hnrnpa1 Danio rerio ENSDARG00000036675 I 0.743
zgc:66127 Danio rerio ENSDARG00000011020 I 0.736
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.800
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.915
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.922
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.752
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.821
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.721
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.702
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.915
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.743
HNRNPA3 Homo sapiens ENSG00000170144 I 0.915
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.921
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.821
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.752
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.807
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.703
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.779
LOC100066794 Equus caballus ENSECAG00000023237 I 0.921
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.821
LOC100054206 Equus caballus ENSECAG00000006699 I 0.739
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.823
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.764