CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SART3
(
Gasterosteus aculeatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGACG00000008787
T37465_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000011605
RRM
650
720
VFISNLAYTLEEPEAKLRTLFETCGPIEQVRPVFASKGAFKGYGYVQFESTVSVAEALKLDRREVEGRPMF
ENSGACP00000011605
RRM
747
816
IFISGLPFSCTKEQLEEICKGHGTIKDIRLVTYRSGKPKGLAYVEFADEAQASHAVLKMDGMCVEDNKIS
ENSGACP00000011610
RRM
553
623
VFISNLAYTLEEPEAKLRTLFETCGPIEQVRPVFASKGAFKGYGYVQFESTVSVAEALKLDRREVEGRPMF
ENSGACP00000011610
RRM
650
719
IFISGLPFSCTKEQLEEICKGHGTIKDIRLVTYRSGKPKGLAYVEFADEAQASHAVLKMDGMCVEDNKIS
Links
Other
RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SART3
Tetraodon nigroviridis
ENSTNIG00000015867
N
0.787
SART3
Takifugu rubripes
ENSTRUG00000014173
N
0.780
SART3
Oryzias latipes
ENSORLG00000006895
N
0.780