CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SART3
(
Takifugu rubripes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTRUG00000014173
T42345_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000036246
RRM
679
749
VFISNLAYTLEEPEAKLRTMFEPCGPISQIRPVFSTKGTFKGYCYIQFESVVSVSEALKLDRQEMENRPMF
ENSTRUP00000036246
RRM
776
845
IFISGLPFSCTKKQLEEVCSSYGTIRDVRLVTYRSGKPKGLAYVEFAEETHASQAVLKMDGTVIDGNTIS
ENSTRUP00000036247
RRM
653
723
VFISNLAYTLEEPEAKLRTMFEPCGPISQIRPVFSTKGTFKGYCYIQFESVVSVSEALKLDRQEMENRPMF
ENSTRUP00000036247
RRM
750
819
IFISGLPFSCTKKQLEEVCSSYGTIRDVRLVTYRSGKPKGLAYVEFAEETHASQAVLKMDGTVIDGNTIS
Links
Other
RRM
family RBPs
Other
Takifugu rubripes
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SART3
Tetraodon nigroviridis
ENSTNIG00000015867
N
0.929
SART3
Gasterosteus aculeatus
ENSGACG00000008787
N
0.780
SART3
Oryzias latipes
ENSORLG00000006895
N
0.723