SETD1A (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000014930 T42129_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000017976 RRM 96 163

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SETD1B Anolis carolinensis ENSACAG00000011162 N 0.721
SETD1A Oryzias latipes ENSORLG00000002213 N 0.912
SETD1A Procavia capensis ENSPCAG00000014351 N 0.794
ENSPPYG00000007296 Pongo pygmaeus ENSPPYG00000007296 N 0.794
SETD1A Pan troglodytes ENSPTRG00000008024 N 0.794
SETD1A Pteropus vampyrus ENSPVAG00000011049 N 0.794
Q4G026_RAT Rattus norvegicus ENSRNOG00000019045 N 0.794
SETD1A Sorex araneus ENSSARG00000005591 N 0.794
SETD1A Sus scrofa ENSSSCG00000007782 N 0.794
SETD1A Tupaia belangeri ENSTBEG00000009714 N 0.794
SETD1B Taeniopygia guttata ENSTGUG00000006093 N 0.706
SETD1A Takifugu rubripes ENSTRUG00000008953 N 0.985
SETD1A Tarsius syrichta ENSTSYG00000014425 N 0.794
SETD1A Tursiops truncatus ENSTTRG00000015493 N 0.794
setd1a Xenopus tropicalis ENSXETG00000001921 N 0.779
setd1b Xenopus tropicalis ENSXETG00000003760 N 0.735
Ame_R013286 Ailuropoda melanoleuca Ame_R013286 N 0.794
AAH81016 Xenopus laevis AAH81016 N 0.706
SETD1A Ochotona princeps ENSOPRG00000016034 N 0.794
SETD1A Oryctolagus cuniculus ENSOCUG00000022182 N 0.794
SETD1A Ornithorhynchus anatinus ENSOANG00000013155 N 0.809
SETD1A Bos taurus ENSBTAG00000002345 N 0.794
SETD1A Canis familiaris ENSCAFG00000016758 N 0.794
LOC100415635 Callithrix jacchus ENSCJAG00000003000 N 0.794
SETD1A Cavia porcellus ENSCPOG00000025456 N 0.794
SETD1A Echinops telfairi ENSETEG00000014170 N 0.794
SETD1A Felis catus ENSFCAG00000002588 N 0.794
SETD1A Homo sapiens ENSG00000099381 N 0.794
SETD1B Homo sapiens ENSG00000139718 N 0.706
SETD1A Gasterosteus aculeatus ENSGACG00000013688 N 0.941
SETD1B Gorilla gorilla ENSGGOG00000006715 N 0.706
SETD1A Gorilla gorilla ENSGGOG00000016052 N 0.794
SETD1A Loxodonta africana ENSLAFG00000023335 N 0.794
SETD1B Loxodonta africana ENSLAFG00000026518 N 0.706
SETD1A Macropus eugenii ENSMEUG00000003396 N 0.765
ENSMMUG00000012647 Macaca mulatta ENSMMUG00000012647 N 0.706
SETD1A Monodelphis domestica ENSMODG00000001726 N 0.765
Setd1a Mus musculus ENSMUSG00000042308 N 0.794
Q66J90 Xenopus laevis Q66J90 N 0.706