SETD1A (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000002213 T40091_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000002754 RRM 96 163

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SETD1A Gasterosteus aculeatus ENSGACG00000013688 N 0.941
SETD1A Takifugu rubripes ENSTRUG00000008953 N 0.926
SETD1A Tetraodon nigroviridis ENSTNIG00000014930 N 0.912
SETD1A Ornithorhynchus anatinus ENSOANG00000013155 N 0.824
SETD1A Homo sapiens ENSG00000099381 N 0.794
SETD1A Felis catus ENSFCAG00000002588 N 0.794
SETD1A Cavia porcellus ENSCPOG00000025456 N 0.794
LOC100415635 Callithrix jacchus ENSCJAG00000003000 N 0.794
SETD1A Echinops telfairi ENSETEG00000014170 N 0.794
SETD1A Canis familiaris ENSCAFG00000016758 N 0.794
SETD1A Oryctolagus cuniculus ENSOCUG00000022182 N 0.794
Setd1a Mus musculus ENSMUSG00000042308 N 0.794
SETD1A Loxodonta africana ENSLAFG00000023335 N 0.794
SETD1A Gorilla gorilla ENSGGOG00000016052 N 0.794
SETD1A Ochotona princeps ENSOPRG00000016034 N 0.794
SETD1A Bos taurus ENSBTAG00000002345 N 0.794
Q4G026_RAT Rattus norvegicus ENSRNOG00000019045 N 0.794
SETD1A Sorex araneus ENSSARG00000005591 N 0.794
SETD1A Pteropus vampyrus ENSPVAG00000011049 N 0.794
SETD1A Pan troglodytes ENSPTRG00000008024 N 0.794
ENSPPYG00000007296 Pongo pygmaeus ENSPPYG00000007296 N 0.794
SETD1A Procavia capensis ENSPCAG00000014351 N 0.794
SETD1A Sus scrofa ENSSSCG00000007782 N 0.794
SETD1A Tursiops truncatus ENSTTRG00000015493 N 0.794
Ame_R013286 Ailuropoda melanoleuca Ame_R013286 N 0.794
SETD1A Tupaia belangeri ENSTBEG00000009714 N 0.794
SETD1A Tarsius syrichta ENSTSYG00000014425 N 0.794
SETD1A Monodelphis domestica ENSMODG00000001726 N 0.779
SETD1A Macropus eugenii ENSMEUG00000003396 N 0.779
setd1a Xenopus tropicalis ENSXETG00000001921 N 0.765